for storing it in one object, i do this...
MQTT (topic/subtopic/#) --> function node
var val = msg.payload; // get the value
var key = msg.topic; //get the topic
var mqttData= flow.get("mqttData") || {}; //get the store object
mqttData[key] = val; // add/update the value
flow.set("mqttData", mqttData); // save to flow context